Structure of PDB 5xnl Chain G

Receptor sequence

>5xnlG (length=219) Species: 3888 (Pisum sativum) [Search protein sequence]

GSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNR
ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY
LGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD
PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH
LSDPVNNNAWSYATNFVPG

3D structure

PDB

5xnl Structure and assembly mechanism of plant C2S2M2-type PSII-LHCII supercomplex

Chain

Resolution

2.7 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	CHL	G	V22 K23 Y24 L25 G26 F28 Y44 W46	V10 K11 Y12 L13 G14 F16 Y32 W34
BS02	CLA	G	G42 D43 Y44 W46 D47 L51 S52 N61 R62 E65 R185 M188 F189 F192	G30 D31 Y32 W34 D35 L39 S40 N49 R50 E53 R173 M176 F177 F180
BS03	CLA	G	L64 H68 F195	L52 H56 F183
BS04	CLA	G	L74 L77 G78 F81 P82 F92 Q103 L110 Y112 L113	L62 L65 G66 F69 P70 F80 Q91 L98 Y100 L101
BS05	CHL	G	S117 V119 H120 A121 Q122 S123	S105 V107 H108 A109 Q110 S111
BS06	CHL	G	W71 I127 Q131 L134	W59 I115 Q119 L122
BS07	CHL	G	F98 G101 S102 Q131 F195	F86 G89 S90 Q119 F183
BS08	CHL	G	R70 W71 L74 V138 Y141 R142 G146 P147 L148 G149 P157 S160 F161	R58 W59 L62 V126 Y129 R130 G134 P135 L136 G137 P145 S148 F149
BS09	CHL	G	L64 I67 H68 W71 Q131 M135 G136 E139 R142	L52 I55 H56 W59 Q119 M123 G124 E127 R130
BS10	CLA	G	R70 M73 L74 Y156 P157 G158 F161 D162 L166 F173 L176 K177 K179 E180	R58 M61 L62 Y144 P145 G146 F149 D150 L154 F161 L164 K165 K167 E168
BS11	CLA	G	W16 K179 K182 N183 L186	W4 K167 K170 N171 L174
BS12	CLA	G	L176 K179 N183 L186	L164 K167 N171 L174
BS13	CLA	G	F189 G193 V196 Q197 V200 T201 N208 H212 N219 N220 A221	F177 G181 V184 Q185 V188 T189 N196 H200 N207 N208 A209
BS14	CLA	G	H212 L213 P216 N220 W222	H200 L201 P204 N208 W210
BS15	CHL	G	W128 G136	W116 G124
BS16	CHL	G	W222 A225 F228 V229	W210 A213 F216 V217
BS17	CHL	G	W46 T48	W34 T36

Gene Ontology

	Biological Process
GO:0009765	photosynthesis, light harvesting

	Cellular Component
GO:0016020	membrane

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:5xnl, PDBe:5xnl, PDBj:5xnl
PDBsum	5xnl
PubMed	28839073
UniProt	P27490\|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic (Gene Name=CAB8)

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