Structure of PDB 5xf6 Chain G

Receptor sequence
>5xf6G (length=106) Species: 8355 (Xenopus laevis) [Search protein sequence]
AKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEIL
ELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNIQS
VLLPKK
3D structure
PDB5xf6 Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation
ChainG
Resolution2.63 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna G R29 R35 R42 V43 K75 T76 R77 R16 R22 R29 V30 K62 T63 R64
BS02 dna G R17 R20 R29 R32 R42 R77 R4 R7 R16 R19 R29 R64
BS03 RUD G E61 E64 E48 E51
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:5xf6, PDBe:5xf6, PDBj:5xf6
PDBsum5xf6
PubMed29146919
UniProtP06897|H2A1_XENLA Histone H2A type 1

[Back to BioLiP]