Structure of PDB 5t61 Chain G

Receptor sequence
>5t61G (length=568) Species: 145261 (Methanothermobacter wolfeii) [Search protein sequence]
EYIIKNGFVYCPLNGVDGEKMDICVKDGKIVESVSDSAKVIDASGKIVMP
GGVDPHSHIAGAKVNVGRMYRPEDSKRDAEKFKGGRAGSGFSVPSTFMTG
YRYAQMGYTTAMEAAMPPLLARHTHEEFHDTPIIDHAAYPLFGNNWFVME
YLKEGDVDACAAYASWLLRATKGYTIKIVNPAGTEAWGWGGNVHGIYDPA
PYFDITPAEIIKGLAEVNEKLQLPHSIHLHCNDLGHPGNYETTLASFDVP
KNIKPNPATGSRDTVLYATHVQFHSYGGTTWRDFVSEAPKIADYVNKNDH
IVIDVGQITLDETTTMTADGPMEYDLHSLNGLKWANCDVELETGSGVVPF
IYSARAPVPAVQWAIGMELFLLIDNPEKVCLTTDSPNAGPFTRYPRVIAW
LMSNKYRMNLIEGELHKWAQRKSTVATIDREYTFSEIAQITRATSAKVLG
LSDTKGHLGVGADADIAVYDINPETVDPSAEYMAIEEAFSRAACVLKDGE
IVVKDGEVVASPHGRTYWVDTQVDESIYSEVLANVESKFKQYYSVNFANY
PVQDDYLPKSAPVKGVML
3D structure
PDB5t61 The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters.
ChainG
Resolution2.55 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN G K178 H231 H271 K177 H230 H270
BS02 ZN G H57 H59 K178 D385 H56 H58 K177 D384
BS03 MFN G H231 L235 H271 F274 W282 T318 M323 L330 F351 Y353 P358 V359 Q363 D385 H417 W419 H230 L234 H270 F273 W281 T317 M322 L329 F350 Y352 P357 V358 Q362 D384 H416 W418
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Tue Dec 3 04:07:23 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '5t61', asym_id = 'G', title = 'The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='5t61', asym_id='G', title='The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0016810', uniprot = '', pdbid = '5t61', asym_id = 'G'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0016810', uniprot='', pdbid='5t61', asym_id='G')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>