Structure of PDB 5onb Chain G

Receptor sequence
>5onbG (length=270) Species: 9606 (Homo sapiens) [Search protein sequence]
MLEREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAA
LLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHI
PLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIP
LCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGK
MVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQV
LKDDTTTKRWLAQLVKNLQE
3D structure
PDB5onb DrosophilaBag-of-marbles directly interacts with the CAF40 subunit of the CCR4-NOT complex to elicit repression of mRNA targets.
ChainG
Resolution3.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide G A84 H85 N88 Q98 R130 E133 Y134 L137 T138 G141 G144 A145 K148 F184 A69 H70 N73 Q83 R115 E118 Y119 L122 T123 G126 G129 A130 K133 F169
Gene Ontology
Biological Process
GO:0006402 mRNA catabolic process
Cellular Component
GO:0030014 CCR4-NOT complex

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5onb, PDBe:5onb, PDBj:5onb
PDBsum5onb
PubMed29255063
UniProtQ92600|CNOT9_HUMAN CCR4-NOT transcription complex subunit 9 (Gene Name=CNOT9)

[Back to BioLiP]