Structure of PDB 5jyd Chain G

Receptor sequence

>5jydG (length=291) Species: 216591 (Burkholderia cenocepacia J2315) [Search protein sequence]

LTNPVDLYPKPPFPHQVQAPPGLASRMQPRPDHGEQSYRGRGRLVGRKTL
VTGGDSGIGRAAAIAFAREGADVAIGYLPVEESDAREVVALIRAAGRQAV
ALPGDIRDETFCQRLVARAAEALGGLDILVNNAARQQALDSIGEMTTEHF
DATVKTNLYGMFWITKAAIPHLPPGASIINTTSVQAVRASANLLDYATTK
AGIIAFTRSLAKQLGPRGIRVNAVAPGPYWTPLQSSGGQPPETVVNYAAG
SPYGRPGQPAEIAPLYVALAASETSYANGQVWGADGGLGIF

3D structure

PDB

5jyd TBD

Chain

Resolution

1.65 Å

3D
structure

Catalytic site residues are labeled in the structure
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Enzymatic activity

Catalytic site (original residue number in PDB)	G80 S206 L216 Y219 K223 P264
Catalytic site (residue number reindexed from 1)	G57 S183 L193 Y196 K200 P241
Enzyme Commision number	?

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	NAD	G	G76 D78 S79 G80 I81 Y100 L101 E104 G127 D128 I129 N155 A156 A157 T204 S206 Y219 K223 P249 G250 P251 Y252 T254 L256 Q257	G53 D55 S56 G57 I58 Y77 L78 E81 G104 D105 I106 N132 A133 A134 T181 S183 Y196 K200 P226 G227 P228 Y229 T231 L233 Q234
BS02	MG	G	D78 S79 E104	D55 S56 E81

Gene Ontology

	Molecular Function
GO:0016491	oxidoreductase activity

View graph for
Molecular Function

External links

PDB	RCSB:5jyd, PDBe:5jyd, PDBj:5jyd
PDBsum	5jyd
PubMed
UniProt	B4EEE3

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