Structure of PDB 5f1i Chain G

Receptor sequence
>5f1iG (length=271) Species: 9615 (Canis lupus familiaris) [Search protein sequence]
GSHSLRYFYTSVSRPGRGDPRFIAVGYVDDTQFVRFDSDAATGRTEPRAP
WVEQEGPEYWDGETRKVKETAQVYRVDLDTLRGYYNQSEAGSHTIQTMYG
CDLGPGGRLLRGYRQDAYDGADYIALNEDLRSWTAADTAAQITRRKWEAA
GVAELQWRNYLETTCVEWLQRYLEMGKETLLRAEPPSTRVTRHPISDHEV
TLRCWALGFYPAEITLTWQRDGEDQTQDTEVVDTRPAGDGTFQKWAAVVV
PSGQEQRYTCHVQHEGLVEPV
3D structure
PDB5f1i Diversified Anchoring Features the Peptide Presentation of DLA-88*50801: First Structural Insight into Domestic Dog MHC Class I
ChainG
Resolution2.904 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide G L155 N159 E167 L155 N159 E167
BS02 peptide G Y7 Y9 Y59 E63 K66 T70 D77 Y84 Y99 D116 Y123 T143 K146 W147 Q156 W157 Y160 W168 Y172 Y7 Y9 Y59 E63 K66 T70 D77 Y84 Y99 D116 Y123 T143 K146 W147 Q156 W157 Y160 W168 Y172
Gene Ontology
Biological Process
GO:0002474 antigen processing and presentation of peptide antigen via MHC class I
Cellular Component
GO:0016020 membrane
GO:0030670 phagocytic vesicle membrane
GO:0042612 MHC class I protein complex
GO:0098553 lumenal side of endoplasmic reticulum membrane

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5f1i, PDBe:5f1i, PDBj:5f1i
PDBsum5f1i
PubMed27511732
UniProtJ9UGS3

[Back to BioLiP]