Structure of PDB 3ko2 Chain G

Receptor sequence
>3ko2G (length=161) Species: 141716 (Monomastix sp. OKE-1) [Search protein sequence]
TLQPTEAAYIAGFLDGDGSIYARLIPRPDYKDIKYQVELAISFIQRKDKF
PYLQDIYDQLGKRGTLRKDRGDGIADYTIWGSTHLSIILPDLVPYLRIKK
KQANRILHIINLYPQAQKNPSKFLDLVKIVDDVQNLNKRADELKSTNYDR
LLEEFLKAGKI
3D structure
PDB3ko2 Computational reprogramming of homing endonuclease specificity at multiple adjacent base pairs.
ChainG
Resolution2.9 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) G21 D22
Catalytic site (residue number reindexed from 1) G16 D17
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna G D22 S24 R28 I49 Q50 R51 R75 Q139 N142 D17 S19 R23 I44 Q45 R46 R70 Q134 N137
BS02 dna G R32 Y35 T70 R72 R75 W85 Y118 R144 R27 Y30 T65 R67 R70 W80 Y113 R139
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
GO:0046872 metal ion binding
Cellular Component
GO:0009507 chloroplast

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:3ko2, PDBe:3ko2, PDBj:3ko2
PDBsum3ko2
PubMed20435674
UniProtC0JWR6

[Back to BioLiP]