Structure of PDB 3j7q Chain G

Receptor sequence

>3j7qG (length=241) Species: 9823 (Sus scrofa) [Search protein sequence]

KVVNLLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLK
VPPTINQFTQALDRQTATQLLKLTHKYRPETKQEKKQRLLARAEKKAAGK
GDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCR
KMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTN
YNDRYNEIRRHWGGNVLGPKSVARITKLEKAKAKELATKLG

3D structure

PDB

3j7q Structure of the Mammalian ribosome-sec61 complex to 3.4 a resolution.

Chain

Resolution

3.4 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	G	E33 K34 R35 K37 F39 G40 I41 Q43 D44 I45 Q46 P47 R49 L51 R53 F54 V55 K56 P58 R59 Y60 R62 K72 R73 L74 Q108 K110 R113 R132 G139 V140 N141 D162 P163 L166 K187 A188 R192 R196 K197 T198 C199 T200 P244 K245 S246 R249	E8 K9 R10 K12 F14 G15 I16 Q18 D19 I20 Q21 P22 R24 L26 R28 F29 V30 K31 P33 R34 Y35 R37 K47 R48 L49 Q83 K85 R88 R107 G114 V115 N116 D137 P138 L141 K162 A163 R167 R171 K172 T173 C174 T175 P219 K220 S221 R224
BS02	rna	G	R53 W57 Y60 I61 Q64 R65 R89 H159 D160 K185 G186 R189	R28 W32 Y35 I36 Q39 R40 R64 H134 D135 K160 G161 R164

Gene Ontology

	Biological Process
GO:0042254	ribosome biogenesis

	Cellular Component
GO:1990904	ribonucleoprotein complex

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:3j7q, PDBe:3j7q, PDBj:3j7q
PDBsum	3j7q
PubMed	24930395
UniProt	A0A4X1W808

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