Structure of PDB 3glf Chain G

Receptor sequence
>3glfG (length=378) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
GLEVLFQGPHMSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHA
YLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDL
IEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALL
KTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHI
LNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM
LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLH
RIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELP
YAPDRRMGVEMTLLRALAFHPRMPLPEP
3D structure
PDB3glf The mechanism of ATP-dependent primer-template recognition by a clamp loader complex.
ChainG
Resolution3.388 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.7.7: DNA-directed DNA polymerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna G T99 K100 V101 S132 H134 T109 K110 V111 S142 H144 PDBbind-CN: Kd=0.18uM
BS02 ADP G A7 W10 R11 V19 G48 V49 G50 K51 T52 S53 L214 R215 A17 W20 R21 V29 G58 V59 G60 K61 T62 S63 L224 R225
BS03 BEF G R47 K51 E127 R215 R57 K61 E137 R225
BS04 MG G T52 D126 T62 D136
BS05 ZN G C76 C79 C86 C89
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0006260 DNA replication
Cellular Component
GO:0009360 DNA polymerase III complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3glf, PDBe:3glf, PDBj:3glf
PDBsum3glf
PubMed19450514
UniProtP06710|DPO3X_ECOLI DNA polymerase III subunit tau (Gene Name=dnaX)

[Back to BioLiP]