Structure of PDB 7zb2 Chain FFF

Receptor sequence

>7zb2FFF (length=718) Species: 72120 (Omphalotus olearius)

FPGWGPYPPVERDETSAITYSSKLHGSVTVRDPYSQLEVPFEDSEETKAF
VHSQRKFARTYLDENPDREAWLETLKKSWNYRRFSALKPESDGHYYFEYN
DGLQSQLSLYRVRMGEEDTVLTESGPGGELFFNPNLLSLDGNAALTGFVM
SPCGNYWAYGVSEHGSDWMSIYVRKTSSPHLPSQERGKDPGRMNDKIRHV
RFFIVSWTSDSKGFFYSRYPPEDNAPAMNCMVYYHRIGEDQESDVLVHED
PEHPFWISSVQLTPSGRYILFAASRDASHTQLVKIADLHENDIGTNMKWK
NLHDPWEARFTIVGDEGSKIYFMTNLKAKNYKVATFDANHPDEGLTTLIA
EDPNAFLVSASIHAQDKLLLVYLRNASHEIHIRDLTTGKPLGRIFEDLLG
QFMVSGRRQDNDIFVLFSSFLSPGTVYRYTFGEEKGYRSLFRAISIPGLN
LDDFMTESVFYPSKDGTSVHMFITRPKDVLLDGTSPVLQYGYGGFSLAML
PTFSLSTLLFCKIYRAIYAIPNIRGGSEYGESWHREGMLDKKQNVFDDFN
AATEWLIANKYASKDRIAIRGGANGGVLTTACANQAPGLYRCVITIEGII
DMLRFPKFTFGASWRSEYGDPEDPEDFDFIFKYSPYHNIPPPGDTVMPAM
LFFTAAYDDRVSPLHTFKHVAALQHNFPKGPNPCLMRIDLNGKSTQEMLE
ETADEYSFIGKSMGLTMQ

3D structure

• PDB: 7zb2 Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides
• Chain: FFF
• Resolution: 1.94 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	MG	FFF	N529 I530 E535	N522 I523 E528

Gene Ontology

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UnboundLocalError

Python 3.6.8: /usr/bin/python3 Sat Nov 30 20:28:35 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()

   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)

   1444         else:

=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)

   1446     

   1447     uniprot_line=''

pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '7zb2', asym_id = 'FFF', title = 'Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides'

 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='7zb2', asym_id='FFF', title='Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides')

    839 

    840     if go:

=>  841         display_go(go,uniprot,pdbid,asym_id)

    842     return pubmed,uniprot

    843 

global display_go = <function display_go>, go = '0004252,0006508,0008236', uniprot = '', pdbid = '7zb2', asym_id = 'FFF'

 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004252,0006508,0008236', uniprot='', pdbid='7zb2', asym_id='FFF')

    480         '''.replace("$namespace_link",namespace_link

    481           ).replace("$namespace",namespace

=>  482           ).replace("$uniprot",u

    483         ))

    484         for l,(term,name) in enumerate(go2aspect[Aspect]):

u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>