Structure of PDB 5j4d Chain FC

Receptor sequence
>5j4dFC (length=60) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence]
MPRLKVKLVKSPIGYPKDQKAALKALGLRRLQQERVLEDTPAIRGNVEKV
AHLVRVEVVE
3D structure
PDB5j4d Structural Basis for Translation Termination on a Pseudouridylated Stop Codon.
ChainFC
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna FC K10 S11 I13 G14 Y15 P16 K17 D18 A21 A22 K24 A25 R29 R30 L31 Q32 P41 A42 G45 N46 K49 K10 S11 I13 G14 Y15 P16 K17 D18 A21 A22 K24 A25 R29 R30 L31 Q32 P41 A42 G45 N46 K49
BS02 rna FC Y15 Q19 H52 Y15 Q19 H52
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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External links
PDB RCSB:5j4d, PDBe:5j4d, PDBj:5j4d
PDBsum5j4d
PubMed27107638
UniProtQ72I22|RL30_THET2 Large ribosomal subunit protein uL30 (Gene Name=rpmD)

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