Structure of PDB 6sg9 Chain F4

Receptor sequence
>6sg9F4 (length=541) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
NQQVVYRSIRDCRERAFHLIQELVSSPGVASLLELYDKAYYFLHLLHRTI
LVPRNVVRDTDDFTEFLLRCFRRPQLSDAAIVDGFVEWMETSLMSAGQFV
SFVEVLQLVGSYVRYHKGVRWGARCGYRLHPWHDTYCPSSRAEQMPYVHL
LQWLMRAKPTKLEEKIDNKEGAHGASNRLGFTALDCGCHSGYMTELLLKA
GAQEVLGVDVSPHHLGNAEATLSEHLRERRSSSHSRKTVQFVRCDILPDL
SDEAEGSTNSAAAENRRRLARCHHMPSDSDGLKTETEVTGPFDLLLFHPP
LPLLFPTWPLFHDLYESVDQLAYDAGRRHPHCRLSVLNEFLQRLLGRLVA
PLIKDNGYVAFILPRNFDTRAILQRMSLAPLVPLSDVVTMTLEGSYTLVL
KRSHSLSSLLNRMDYIQKSISAFIRAFVSPQHRSRVEQEVRDFYSNHQAI
DLIVMRKIARQIAYEDSFEYEEYIPAGGSPLAHHWTEMTPSFSYLEDEFF
GCALTPLEKQEWYIDEKLVKSEAAKVDLMNELSRFELKDFD
3D structure
PDB6sg9 Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
ChainF4
Resolution3.1 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide F4 E781 W782 L788 V789 E792 N800 S803 R804 E511 W512 L518 V519 E522 N530 S533 R534
BS02 peptide F4 D809 D811 D539 D541
BS03 peptide F4 F670 T691 E698 F702 F468 T489 E496 F500
External links