Structure of PDB 6sga Chain F3

Receptor sequence
>6sgaF3 (length=888) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
PRRIPGTTKVTYTNKKGRTFSFSVPVSELTHPQVTLESAAGTWREMDTSF
CELGDIEDDMPSPVDECLRGGSSLDKRLIQEVRERFVSFCREYVLMDTSG
MKSTILSTELNAGPDYEHYDRRLRRKRHWLAIRHRFEDVRYVIWPDVVNP
SLTAGEMLEALLWLDAASTFCVRKVHPSDLGDKSEFLPLDLQREVEVVAC
HARRDLDFFDPSATSLEQFTACAALCVNHRVPFSLFFPAQDVCGDASVST
GQCIVANAPSPHTALGAVRIMALISEGSGSDIGKTIMFSDAFGAVTRFGI
LRGLSRVMSVEAFGCKDALENVNESELCIILHFCAEVREQNAAFFRRYEA
SEEDSDPQQVSFLAKYQQLSQIALARCKRLLYHPDSPRAQVMSEDGYIPL
VELQRHAEGTNKAALIHYNLGIRSAQGMRRVALGAQSSARLAELVSRLEE
ASARVSGNTLVNDLVHHLSHKAAAGKMSLTLREVNTLLPLLSRMRRESPN
GALDARFDRVFNAIDTAIGAAMRHNCTLDELLDLAEGLAACEMVPSALKQ
VEMVLIRSVMMHECSPMHLRRMLQAMFTLMRTSVPQVLLQSVASRVADYI
KEASHMNHEECEQLLELLVVLGKCGYGALPGLVTIYWEAQLIDSMQLNPR
LRCSYASLLASAAFALKKHDKRAWEGLADESHRLFMEYTRCNKENDIGRF
AECVTGLAVLTQIKDNTNSSDVAFLKEYLSATSLELKSCEVIRVQELTDL
LGRTLEWSEALGVVAPDVVIQLEKALFVMLENVSHTAPGVGIPDELVTAA
CCLVDMSSASLELRKAAAGVVGGAIVHAEEALETLRSGAPTQVRPGHSFD
VAALASAERENVYKNSILQYCAALQRSGMSTHVEELWS
3D structure
PDB6sga Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
ChainF3
Resolution3.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide F3 Y164 E165 Y116 E117
BS02 rna F3 K150 T152 H166 R169 R170 R173 F234 R237 K238 H481 G491 M492 R493 Q500 K102 T104 H118 R121 R122 R125 F170 R173 K174 H417 G427 M428 R429 Q436
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6sga, PDBe:6sga, PDBj:6sga
PDBsum6sga
PubMed31515389
UniProtQ38E61

[Back to BioLiP]