Structure of PDB 6hcf Chain F1

Receptor sequence
>6hcfF1 (length=262) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNR
LKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRL
IYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPD
PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERH
PGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE
RDKRLAAKQSSG
3D structure
PDB6hcf ZNF598 Is a Quality Control Sensor of Collided Ribosomes.
ChainF1
Resolution3.9 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna F1 A2 R3 K6 K7 H8 K10 R11 V12 K16 M19 K22 F27 P29 R30 T33 G34 R51 T57 D59 M66 Q67 R77 R108 F130 G132 T133 K134 A219 R255 A1 R2 K5 K6 H7 K9 R10 V11 K15 M18 K21 F26 P28 R29 T32 G33 R50 T56 D58 M65 Q66 R76 R107 F129 G131 T132 K133 A218 R254
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 16 02:42:56 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6hcf', asym_id = 'F1', title = 'ZNF598 Is a Quality Control Sensor of Collided Ribosomes.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6hcf', asym_id='F1', title='ZNF598 Is a Quality Control Sensor of Collided Ribosomes.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003723,0003735,0005840,0006412', uniprot = '', pdbid = '6hcf', asym_id = 'F1'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003723,0003735,0005840,0006412', uniprot='', pdbid='6hcf', asym_id='F1')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>