Structure of PDB 8yhd Chain F

Receptor sequence

>8yhdF (length=199) Species: 256318 (metagenome) [Search protein sequence]

AKTMKKIYVTMKTLSPLYTGEVRREDKEAAQKRVNFPVRKTATNKVLIPF
KGALRSALEIMLKAKGENVCDTGESRARPCGRCVTCSLFGSMGRAGRASV
DFLISNDTKEQIVRESTHLRIERQTKSASDTFKGEEVIEGATFTATITIS
NPQEKDLSLIQSALKFIEENGIGGWLNKGYGRVSFEVKSEDVATDRFLK

3D structure

PDB

8yhd Structural basis for the activity of the type VII CRISPR-Cas system.

Chain

Resolution

2.93 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	F	G21 E22 F37 R40 K52 G53 A54 S57 T73 F90 G91 S92 M93 T118 H119 L120 R121 I122 R124 K127 F133 G174 G175 W176 N178 K179	G20 E21 F36 R39 K51 G52 A53 S56 T72 F89 G90 S91 M92 T117 H118 L119 R120 I121 R123 K126 F132 G173 G174 W175 N177 K178
BS02	rna	F	N36 F37 R79 M93 T118 D131 T132 F133 K134	N35 F36 R78 M92 T117 D130 T131 F132 K133
BS03	ZN	F	C71 C84	C70 C83

External links

PDB	RCSB:8yhd, PDBe:8yhd, PDBj:8yhd
PDBsum	8yhd
PubMed	39143216

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