Structure of PDB 8xvb Chain F

Receptor sequence
>8xvbF (length=246) Species: 2681603 (Escherichia phage Mu) [Search protein sequence]
LPEPPRFVETQTVKQIWTSMRFASLTESIAVVCGNPGVGKTEAAREYRRT
NNNVWMITITPSCASVLECLTELAFELGMNDAPRRKGPLSRALRRRLEGT
QGLVIIDEADHLGAEVLEELRLLQESTRIGLVLMGNHRVYSNMTGGNRTV
EFARLFSRIAKRTAINKTKKADVKAIADAWQINGEKELELLQQIAQKPGA
LRILNHSLRLAAMTAHGKGERVNEDYLRQAFRELDLDVDISTLLRN
3D structure
PDB8xvb Elucidating the Architectural dynamics of MuB filaments in bacteriophage Mu DNA transposition.
ChainF
Resolution3.4 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna F R150 R151 R84 R85
BS02 dna F S131 L133 R151 K152 S65 L67 R85 K86
BS03 ATP F F73 V74 G103 G105 K106 T107 E108 E174 L267 R268 N271 F7 V8 G37 G39 K40 T41 E42 E108 L201 R202 N205
External links
PDB RCSB:8xvb, PDBe:8xvb, PDBj:8xvb
PDBsum8xvb
PubMed39085263
UniProtP03763|TARGB_BPMU ATP-dependent target DNA activator B (Gene Name=B)

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