Structure of PDB 8vdi Chain F

Receptor sequence
>8vdiF (length=91) Species: 9606 (Homo sapiens) [Search protein sequence]
KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKG
NRKKMTYQKMARALRNYGKTGEVKKVKKKLTYQFSGEVLGR
3D structure
PDB8vdi Structural Characterization of GC Base Pair Recognition by a Diamidine Small Molecule
ChainF
Resolution1.93 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna F S203 K206 R230 R233 K243 K247 L248 S35 K38 R62 R65 K75 K79 L80
BS02 dna F R171 L172 W213 K217 N219 K221 M223 K227 Y235 R3 L4 W45 K49 N51 K53 M55 K59 Y67
External links
PDB RCSB:8vdi, PDBe:8vdi, PDBj:8vdi
PDBsum8vdi
PubMed
UniProtP17947|SPI1_HUMAN Transcription factor PU.1 (Gene Name=SPI1)

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