Structure of PDB 8v9l Chain F

Receptor sequence
>8v9lF (length=182) Species: 246196 (Mycolicibacterium smegmatis MC2 155) [Search protein sequence]
KALPRLKQRYREEIREALQQEFNYANVMQIPGVVKVVVNMGVGDAARDAK
LINGAINDLALITGQKPEVRRARKSIAQFKLREGMPIGARVTLRGDRMWE
FLDRLISIALPRIRDFRGLSPKQFDGTGNYTFGLNEQSMFHEIDVDSIDR
PRGMDITVVTTATNDAEGRALLRALGFPFKEN
3D structure
PDB8v9l A new family of bacterial ribosome hibernation factors
ChainF
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna F N44 G46 V47 G48 R75 Q83 F84 I92 R95 Q128 F129 D130 T136 L139 N140 G158 D160 N39 G41 V42 G43 R70 Q78 F79 I87 R90 Q123 F124 D125 T131 L134 N135 G153 D155
BS02 rna F N31 Q70 K71 E73 T97 R99 N26 Q65 K66 E68 T92 R94
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8v9l, PDBe:8v9l, PDBj:8v9l
PDBsum8v9l
PubMed38355796
UniProtA0QSG1|RL5_MYCS2 Large ribosomal subunit protein uL5 (Gene Name=rplE)

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