Structure of PDB 8u66 Chain F

Receptor sequence
>8u66F (length=448) Species: 1239 (Bacillota) [Search protein sequence]
FVAGVQPYRKTYYEPGYEPKETDLLCAFRIEPSPGIPLEEAAAAVAAESS
TGTWTEVWSQEMTDLHRYKGRCYAIDGNTAYIAYPLDLFEEGSIVNVMSS
IVGNVFGFKAVRALRLLDMRIPTAYLKTFPGPPTGIAQERDRLKVYHRPL
LGGTIKPKLGLGPKEFARVVYECLVGGLDTTKDDENLNSQPFCRWRDRYL
YVMDAVHRAEEETGEAKGHWLNVTAGDTEEMLRRAEFAKEVGSRYIMVDF
LTAGFSAYATLRRRAEELGLMIHCHRAMHAVFTRPKDHGIHFRVVAKWLR
MAGGDHVHTGTVVGKLEGAREEVRGIADLLREEFVPANPQRGLLFDQPWA
GLKPLFPVASGGIHVWHVPDLVSIYGNDAFFLFGGGTHGHPRGSRAGARA
NRAAVEAVAAAYREGRDILAEGRQILQDAARTCPELREAMELWEGVTF
3D structure
PDB8u66 Deep-branching evolutionary intermediates reveal structural origins of form I rubisco
ChainF
Resolution2.21 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CAP F T58 W59 N109 T53 W54 N104
BS02 MG F K187 D189 E190 K182 D184 E185
BS03 CAP F T159 K161 K187 D189 E190 R281 H313 K320 L321 S365 G366 G389 G390 T154 K156 K182 D184 E185 R276 H308 K315 L316 S360 G361 G384 G385
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 16 08:43:30 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '8u66', asym_id = 'F', title = 'Deep-branching evolutionary intermediates reveal structural origins of form I rubisco'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='8u66', asym_id='F', title='Deep-branching evolutionary intermediates reveal structural origins of form I rubisco')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0000287,0015977,0016984', uniprot = '', pdbid = '8u66', asym_id = 'F'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0000287,0015977,0016984', uniprot='', pdbid='8u66', asym_id='F')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>