Structure of PDB 8kcb Chain F

Receptor sequence
>8kcbF (length=90) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
VALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEA
AEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
3D structure
PDB8kcb Mechanism of heterochromatin remodeling revealed by the DDM1 bound nucleosome structures.
ChainF
Resolution3.17 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna F K64 L65 P66 R69 K19 L20 P21 R24
BS02 dna F R63 R72 R83 F84 Q85 S86 T118 M120 R18 R27 R38 F39 Q40 S41 T73 M75
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
Cellular Component
GO:0000786 nucleosome
GO:0005576 extracellular region
GO:0005634 nucleus
GO:0005694 chromosome
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0009536 plastid
GO:0010369 chromocenter

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:8kcb, PDBe:8kcb, PDBj:8kcb
PDBsum8kcb
PubMed38870940
UniProtP59226|H31_ARATH Histone H3.1 (Gene Name=HTR2)

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