Structure of PDB 8iap Chain F

Receptor sequence

>8iapF (length=426) Species: 10090 (Mus musculus) [Search protein sequence]

FGSLKDEDRIFTNLYGRHDWRLKGALRRGDWYKTKEILLKGPDWILGEMK
TSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIM
RHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGL
IGKNACGSDYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPA
DVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGH
VNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSV
CETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQ
CTPCREGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGA
AWPVQGLIRHFRPELEDRMQRFAQQH

3D structure

PDB

8iap Respiratory complex Peripheral Arm of CI, focus-refined map of type I, Wild type mouse under thermoneutral temperature

Chain

Resolution

3.2 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	peptide	F	R152 Y163 N164 S167 Q170 V171 R174 E178 D194 F196 V197 R199	R121 Y132 N133 S136 Q139 V140 R143 E147 D163 F165 V166 R168
BS02	FMN	F	G87 G89 K98 N116 D118 E119 Y204 E208 A243 N244 T247 L427	G56 G58 K67 N85 D87 E88 Y173 E177 A212 N213 T216 L396
BS03	SF4	F	I205 P223 S378 C379 G380 Q381 C382 C385 C425 L427	I174 P192 S347 C348 G349 Q350 C351 C354 C394 L396

External links

PDB	RCSB:8iap, PDBe:8iap, PDBj:8iap
PDBsum	8iap
PubMed
UniProt	Q91YT0\|NDUV1_MOUSE NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (Gene Name=Ndufv1)

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