Structure of PDB 8i02 Chain F

Receptor sequence
>8i02F (length=235) Species: 4896 (Schizosaccharomyces pombe) [Search protein sequence]
IRNVDYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTC
SIKSHHPPKHPLSIWSQLYDWIDSQNPSQYRLPDDLVHYFHGISRGDTGA
YKETEGEITNLAYCGYCSKPSMGACWVYGCQLCDTFYHKNCKEHAKKCSH
DSIGKKGMRVPFPRLPVSCLYKVSEDGLIKDFLYAIGIEAKKFNNERKKR
ELEVIPPDVKSALLPARTHPNLPIALRTLFNKART
3D structure
PDB8i02 Two assembly modes for SIN3 histone deacetylase complexes.
ChainF
Resolution2.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN F C135 C137 C22 C24
BS02 ZN F H140 C143 H27 C30
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006357 regulation of transcription by RNA polymerase II
GO:0045815 transcription initiation-coupled chromatin remodeling
Cellular Component
GO:0005634 nucleus
GO:0005694 chromosome
GO:0005829 cytosol
GO:0032221 Rpd3S complex
GO:0032991 protein-containing complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8i02, PDBe:8i02, PDBj:8i02
PDBsum8i02
PubMed37076472
UniProtQ09819|YAC5_SCHPO Uncharacterized protein C16C9.05 (Gene Name=SPAC16C9.05)

[Back to BioLiP]