Structure of PDB 8fzi Chain F

Receptor sequence
>8fziF (length=177) Species: 562 (Escherichia coli) [Search protein sequence]
AKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLD
NAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFE
RLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRG
LDITITTTAKSDEEGRALLAAFDFPFR
3D structure
PDB8fzi The ribosome termination complex remodels release factor RF3 and ejects GDP.
ChainF
Resolution3.1 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna F K33 N37 M38 G39 G41 T68 R71 F77 I79 I85 S121 F122 D123 R125 S129 M130 G151 L152 D153 K32 N36 M37 G38 G40 T67 R70 F76 I78 I84 S120 F121 D122 R124 S128 M129 G150 L151 D152
BS02 rna F M26 Q27 Q63 L66 T90 R92 M25 Q26 Q62 L65 T89 R91
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8fzi, PDBe:8fzi, PDBj:8fzi
PDBsum8fzi
PubMed39030416
UniProtA0A140N5A3

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