Structure of PDB 8dp1 Chain F

Receptor sequence
>8dp1F (length=217) Species: 9544 (Macaca mulatta) [Search protein sequence]
YVVMTQSPLSLPITPGQPASISCRSSQRLLHSDGNTYLAWYQQRPGQPPR
RLIYEVSKLDSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCGQNTYLP
YSFGQGSKVEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREAS
VKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSNTDYQSHNVYACE
VTHQGLSSPVTKSFNRG
3D structure
PDB8dp1 Shared recognition mechanism for HIV-1 envelope-reactive V3 glycan broadly neutralizing B cell lineage maturation in humans and macaques
ChainF
Resolution3.46 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN F Y54 E55 Y54 E55
BS02 MAN F R51 Y54 R51 Y54
BS03 MAN F Y54 D60 S61 Y54 D60 S61
External links