Structure of PDB 8dej Chain F

Receptor sequence
>8dejF (length=286) Species: 882 (Nitratidesulfovibrio vulgaris str. Hildenborough) [Search protein sequence]
MTAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRK
IRNHVALTKEGAERFNIYIQEKAILNETHERAYTACDLKPEPKKLPKKVE
DAKRVTDWMCTNFYDIRTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQ
EVSITRMAVTTKAEAEDNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSD
EDLTLFWDALVNMFEHDRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDL
VKVSRAEGSSGPARSFADYAVTVGQAPEGVEVKEML
3D structure
PDB8dej Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
ChainF
Resolution2.86 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna F N29 V45 C46 R49 R52 G120 V122 Q131 V132 R133 I154 T155 R156 M157 S223 R226 N29 V45 C46 R49 R52 G120 V122 Q131 V132 R133 I154 T155 R156 M157 S219 R222
BS02 dna F K93 T125 E126 R173 M175 G176 R177 K93 T125 E126 R169 M171 G172 R173
Gene Ontology
Biological Process
GO:0043571 maintenance of CRISPR repeat elements

View graph for
Biological Process
External links
PDB RCSB:8dej, PDBe:8dej, PDBj:8dej
PDBsum8dej
PubMed36805026
UniProtQ72WF7

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