Structure of PDB 8db5 Chain F

Receptor sequence
>8db5F (length=176) Species: 197 (Campylobacter jejuni) [Search protein sequence]
EIKFNIEESKILNGVYIITPNKFSDLRGDIWTAFTDEYLSNLVPNGIKFK
HDKFINSHFNVLRGIHGDVKTYKLVTCVYGEVHQVVVDCRKDSPTYLKWE
KFIISPRNQQLILLPPNMGNSHYVSSKEAVYYYKLAYEGEYLDAPDQFTY
AWNDERIAIDWPTNSPILSERDILAM
3D structure
PDB8db5 C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
ChainF
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 5.1.3.13: dTDP-4-dehydrorhamnose 3,5-epimerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GDP F I3 N22 F24 R28 I31 T33 I2 N21 F23 R27 I30 T32
BS02 GDP F K54 R64 H67 D144 R172 K53 R63 H66 D143 R171
Gene Ontology
Molecular Function
GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity
GO:0016853 isomerase activity
GO:0016854 racemase and epimerase activity
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:8db5, PDBe:8db5, PDBj:8db5
PDBsum8db5
PubMed36093987
UniProtA0A0S2CFK0

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