Structure of PDB 8a98 Chain F

Receptor sequence

>8a98F (length=142) Species: 347515 (Leishmania major strain Friedlin) [Search protein sequence]

VSRKSPEYTTLRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGP
MKYNGVPIRRIDSRYVIATSTTVDISSVDTAPITAEVFQRTLVSDARAQL
QKKIDAALIAAIKKDAQGKEKAGYLRSVFTVKPGDAPHRWNW

3D structure

PDB

8a98 CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT

Chain

Resolution

2.46 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	F	T28 D80 R82	T10 D62 R64
BS02	rna	F	A43 G44 R45 R47 P62 M69 K70 G73 P75 R77 R78 Y83 F106 L145 V146 S147 Q154 R179 S180 V181 K185 P186	A25 G26 R27 R29 P44 M51 K52 G55 P57 R59 R60 Y65 F88 L92 V93 S94 Q101 R126 S127 V128 K132 P133

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0000027	ribosomal large subunit assembly
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links