Structure of PDB 7yi1 Chain F

Receptor sequence
>7yi1F (length=81) Species: 8355 (Xenopus laevis) [Search protein sequence]
LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVT
YTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
3D structure
PDB7yi1 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S.
ChainF
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna F R35 R45 I46 G48 R78 K79 T80 R14 R24 I25 G27 R57 K58 T59
BS02 dna F T30 P32 R36 R45 T9 P11 R15 R24
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006334 nucleosome assembly
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7yi1, PDBe:7yi1, PDBj:7yi1
PDBsum7yi1
PubMed37468628
UniProtP62799|H4_XENLA Histone H4

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