Structure of PDB 7uzg Chain F

Receptor sequence
>7uzgF (length=457) Species: 10116 (Rattus norvegicus) [Search protein sequence]
NYLSQPRLTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVL
EVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGK
PIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQ
KIPIFSAAGLPHNEIAAQICRQAGLVNFAIVFAAMGVNMETARFFKSDFE
ENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTD
MSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSIT
QIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLS
RLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDL
LYLEFLQKFEKNFITQGPYENRTVYETLDIGWQLLRIFPKEMLKRIPQST
LSEFYPR
3D structure
PDB7uzg Structure of V-ATPase with NCOA7B
ChainF
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP F R400 K403 R351 K354
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0046961 proton-transporting ATPase activity, rotational mechanism
Biological Process
GO:0007035 vacuolar acidification
GO:0030641 regulation of cellular pH
GO:0046034 ATP metabolic process
GO:0097401 synaptic vesicle lumen acidification
GO:1902600 proton transmembrane transport
Cellular Component
GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain
GO:0001726 ruffle
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0005902 microvillus
GO:0016324 apical plasma membrane
GO:0030665 clathrin-coated vesicle membrane
GO:0030672 synaptic vesicle membrane
GO:0031410 cytoplasmic vesicle
GO:0033180 proton-transporting V-type ATPase, V1 domain
GO:0042470 melanosome
GO:0043231 intracellular membrane-bounded organelle
GO:0045202 synapse
GO:0098850 extrinsic component of synaptic vesicle membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7uzg, PDBe:7uzg, PDBj:7uzg
PDBsum7uzg
PubMed
UniProtP62815|VATB2_RAT V-type proton ATPase subunit B, brain isoform (Gene Name=Atp6v1b2)

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