Structure of PDB 7r07 Chain F

Receptor sequence
>7r07F (length=600) Species: 1358 (Lactococcus lactis) [Search protein sequence]
SMKKEFTELYDFIFDPIFLVRYGYYDRSIKNKKMNTAKVELDNEYGKSDS
FYFKVFNMESFADYLRSHDLKTHFNGKKPLSTDPVYFNIPKNIEARRQYK
MPNLYSYMALNYYICDNKKEFIEVFIDNKFSTSKFFNQLNFDYPKTQEIT
QTLLYGGIKKLHLDLSNFYHTLYTHSIPWMIDGKSASKQNRKKGFSNTLD
TLITACQYDETHGIPTGNLLSRIITELYMCHFDKQMEYKKFVYSRYVDDF
IFPFTFENEKQEFLNEFNLICRENNLIINDNKTKVDNFPFVDKSSKSDIF
SFFENITSTNSNDKWIKEISNFIDYCVNEEHLGNKGAIKCIFPVITNTLK
QKKVDTKNIDNIFSKRNMVTNFNVFEKILDLSLKDSRLTNKFLTFFENIN
EFGFSSLSASNIVKKYFSNNSKGLKEKIDHYRKNNFNQELYQILLYMVVF
EIDDLLNQEELLNLIDLNIDDYSLILGTILYLKNSSYKLEKLLKKIDQLF
INTHANYDVKTSRMAEKLWLFRYFFYFLNCKNIFSQKEINSYCQSQNYNS
GQNGYQTELNWNYIKGQGKDLRANNFFNELIVKEVWLISCGENEDFKYLN
3D structure
PDB7r07 Mechanism of protein-primed template-independent DNA synthesis by Abi polymerases.
ChainF
Resolution3.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna F N30 K32 M33 Y44 R96 Y98 Y142 T145 D163 Y168 H169 Y245 D247 K295 F299 G335 K338 C339 P342 V343 N346 Q350 N31 K33 M34 Y45 R97 Y99 Y143 T146 D164 Y169 H170 Y246 D248 K296 F300 G336 K339 C340 P343 V344 N347 Q351
BS02 MG F D163 L164 D247 D164 L165 D248
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0006974 DNA damage response

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7r07, PDBe:7r07, PDBj:7r07
PDBsum7r07
PubMed36107766
UniProtQ48614

[Back to BioLiP]