Structure of PDB 7m15 Chain F

Receptor sequence
>7m15F (length=179) Species: 192222 (Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819) [Search protein sequence]
HMAIEFDIQESKILKGVYIITPNKFRDLRGEIWTAFTDEYLSKLVPDGIK
FKHDKFINSHFNVLRGIHGDVKTYKLVTCVYGEVHQVVVDCRKDSPTYLK
WEKFIISYKNQQLILLPPNMGNSHYVSSAAAVYYYKLAYEGEYMDAPDQF
TYAWNDERIGIDWPTNTPILSDRDILATK
3D structure
PDB7m15 Biosynthesis of d- glycero -l- gluco -Heptose in the Capsular Polysaccharides of Campylobacter jejuni .
ChainF
Resolution1.85 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) H67 K74 Y134 D173
Catalytic site (residue number reindexed from 1) H68 K75 Y135 D174
Enzyme Commision number 5.1.3.13: dTDP-4-dehydrorhamnose 3,5-epimerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 YO7 F H0 N22 F24 R28 I31 T33 H1 N23 F25 R29 I32 T34
BS02 YO7 F K54 R64 H67 K74 N121 H123 Y132 D144 Q148 R172 K55 R65 H68 K75 N122 H124 Y133 D145 Q149 R173
Gene Ontology
Molecular Function
GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity
GO:0016853 isomerase activity
GO:0016854 racemase and epimerase activity
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:7m15, PDBe:7m15, PDBj:7m15
PDBsum7m15
PubMed33900734
UniProtQ0P8I4

[Back to BioLiP]