Structure of PDB 7dnf Chain F

Receptor sequence

>7dnfF (length=155) Species: 32630 (synthetic construct) [Search protein sequence]

DLGKKLLEAARAGQDDEVRILMANGADVNANDVYGITPLHLAAYMGHLEI
VEVLLKYGVDVNASDQFGNTPLHLAADDGHLEIVEVLLKHGTDVNATDTW
GSTPLHLAAHRGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGNEDLA
EILQK

3D structure

PDB

7dnf Distinct conformations of the HIV-1 V3 loop crown are targetable for broad neutralization.

Chain

Resolution

1.78 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	F	E20 R23 Y46 I48 L53 Y56 M57	E8 R11 Y34 I36 L41 Y44 M45

External links

PDB	RCSB:7dnf, PDBe:7dnf, PDBj:7dnf
PDBsum	7dnf
PubMed	34795280

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