Structure of PDB 7dfu Chain F

Receptor sequence
>7dfuF (length=188) Species: 347 (Xanthomonas oryzae) [Search protein sequence]
VPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEA
DNPEKDIYIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALL
LASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEI
LAKHTGQSLETIARDTERDNFKSAVDAQAYGLVDQVLE
3D structure
PDB7dfu Dysregulation of ClpP by Small-Molecule Activators Used Against Xanthomonas oryzae pv. oryzae Infections.
ChainF
Resolution1.901 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.92: endopeptidase Clp.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 EZA F L56 A60 T87 Y90 L46 A50 T77 Y80
BS02 EZA F E34 Y68 Y70 Y120 L122 E24 Y58 Y60 Y110 L112
Gene Ontology
Molecular Function
GO:0004176 ATP-dependent peptidase activity
GO:0004252 serine-type endopeptidase activity
GO:0008236 serine-type peptidase activity
GO:0051117 ATPase binding
Biological Process
GO:0006508 proteolysis
GO:0006515 protein quality control for misfolded or incompletely synthesized proteins
Cellular Component
GO:0005737 cytoplasm
GO:0009368 endopeptidase Clp complex

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External links
PDB RCSB:7dfu, PDBe:7dfu, PDBj:7dfu
PDBsum7dfu
PubMed34218658
UniProtQ5H434|CLPP_XANOR ATP-dependent Clp protease proteolytic subunit (Gene Name=clpP)

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