Structure of PDB 6wl3 Chain F

Receptor sequence

>6wl3F (length=238) Species: 10090 (Mus musculus)

SGVVQSPRHIIKEKGGRSVLTCIPISGHSNVVWYQQTLGKELKFLIQHYE
KVERDKGFLPCRFSVQQFDDYHSEMNMSALELEDSAMYFCASSLRWGDEQ
YFGPGTRLTVVEDLRNVTPPKVSLREPSKAEIANKQKATLQCQARGFFPD
HVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNH
FRCQVQFHGLSEEDKWPEGSPKPVTQNISAEAWGRADS

3D structure

• PDB: 6wl3 Pre-T cell receptors topologically sample self-ligands during thymocyte beta-selection.
• Chain: F
• Resolution: 3.45 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	F	R55 W97	R54 W96

External links

• PDB: RCSB:6wl3, PDBe:6wl3, PDBj:6wl3
• PDBsum: 6wl3
• PubMed: 33335016