Structure of PDB 6vbw Chain F

Receptor sequence

>6vbwF (length=341) Species: 666 (Vibrio cholerae) [Search protein sequence]

MKLPTNLAYERSIDPSDVCFFVVWPDDRKTPLTYNSRTLLGQMEAASLAY
DVSGQPIKSATAEALAQGNPHQVDFCHVPYGASHIECSFSVSFSSELRQP
YKCNSSKVKQTLVQLVELYETKIGWTELATRYLMNICNGKWLWKNTRKAY
CWNIVLTPWPWNGEKVGFEDIRTNYTSRQDFKNNKNWSAIVEMIKTAFSS
TDGLAIFEVRATLHLPTNAMVRPSQVFTEKTQNSRVFQSTTIDGERSPIL
GAFKTGAAIATIDDWYPEATEPLRVGRFGVHREDVTCYRHPSTGKDFFSI
LQQAEHYIEVLSANKTPAQETINDMHFLMANLIKGGMFQHK

3D structure

PDB

6vbw Structure-function insights into the initial step of DNA integration by a CRISPR-Cas-Transposon complex.

Chain

Resolution

3.2 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	dna	F	Q67 G68 N69 P70 H71 S243 M346 H349 K350	Q67 G68 N69 P70 H71 S234 M337 H340 K341
BS02	rna	F	Y9 R11 L39 L40 G41 Y101 W143 Q225 V226 F227 T228 F262 K263 A266 R283 R291 G345 M346	Y9 R11 L39 L40 G41 Y101 W143 Q225 V226 F227 T228 F253 K254 A257 R274 R282 G336 M337

External links

PDB	RCSB:6vbw, PDBe:6vbw, PDBj:6vbw
PDBsum	6vbw
PubMed	31925391

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