Structure of PDB 6rxm Chain F

Receptor sequence
>6rxmF (length=233) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
KPRVLVLTGAGISAESGIRTFRAADGLWEEHRVEDVGTPEGFDRDPELVQ
AFYNARRRQLQQPEIQPNAAHLALAKLQDALGDRFLLVTQNCDNLHERAG
NTNVIHMHGELLKVRCSQSGQALDWTGDVTPEDKCHCCQFPAPLRPHVVW
FGEMPLGMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVEL
NLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKG
3D structure
PDB6rxm Evolved, Selective Erasers of Distinct Lysine Acylations.
ChainF
Resolution1.92 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.3.1.286: protein acetyllysine N-acetyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide F E73 T77 E79 G191 E34 T38 E40 G152
BS02 peptide F W67 H147 V188 F190 G191 E192 M193 Y201 H218 V219 Y220 P221 W28 H108 V149 F151 G152 E153 M154 Y162 H179 V180 Y181 P182
BS03 ZN F C155 C174 C177 C116 C135 C138
Gene Ontology
Molecular Function
GO:0036054 protein-malonyllysine demalonylase activity
GO:0036055 protein-succinyllysine desuccinylase activity
GO:0070403 NAD+ binding

View graph for
Molecular Function
External links
PDB RCSB:6rxm, PDBe:6rxm, PDBj:6rxm
PDBsum6rxm
PubMed32187803
UniProtP75960|NPD_ECOLI NAD-dependent protein deacylase (Gene Name=cobB)

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