Structure of PDB 6o8x Chain F

Receptor sequence
>6o8xF (length=176) Species: 1351 (Enterococcus faecalis) [Search protein sequence]
NRLKEKYIKEVTPSLVEKFNYSSVMQTPKVDKIVINMGVGDAVSNAKNLD
KAVEELALITGQKPLITKAKKSIAGFRLREGMPIGAKVTLRGERMYEFLD
KLVTVSLPRVRDFHGVSKKAFDGRGNYTLGIKELIFPEVDYDLVDKVRGM
DIVIVTTANTDEESRELLAQLGMPFQ
3D structure
PDB6o8x Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis.
ChainF
Resolution3.68 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna F V35 N37 G39 V40 T68 A70 K71 K72 F77 L79 K88 K120 A121 D123 R125 T129 I132 M152 D153 V34 N36 G38 V39 T67 A69 K70 K71 F76 L78 K87 K119 A120 D122 R124 T128 I131 M150 D151
BS02 rna F S23 S24 M26 Q27 Q63 L66 T90 R92 S22 S23 M25 Q26 Q62 L65 T89 R91
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6o8x, PDBe:6o8x, PDBj:6o8x
PDBsum6o8x
PubMed33004869
UniProtA0A1B4XKS2

[Back to BioLiP]