Structure of PDB 6o7h Chain F

Receptor sequence

>6o7hF (length=361) Species: 523850 (Thermococcus onnurineus NA1) [Search protein sequence]

MTERTLKVLSPLHIGTGNELTPVDIYPRENIIHVLDTERAAAAAAAAGAA
AAAAAAGAAAAAAGAAAAAAAAAAAAAAAAAAAAGAAGRKSMQIKEFIKL
NGRPYIPGSSLKGAIRTAVLYKALKECGAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAGAAAAAAAAIRYEPKRDPMKALIVRDSKPVGRKHLAVY
HVEVIGNPQPIPIWVEAIEPGAATDVEIHVDTEALRLNADYFNGLLWECL
KERGEPGEVFEDFLWEAVDEFYTAVMKYETIEVQKFSQVRSFYASLEDHS
GHVLRLGWGSGWLAMTIGLLLVEKGYKWENVRKKLGLGKKREFPKTRRLA
DGMPMGWVVLE

3D structure

PDB

6o7h Second Messenger cA4Formation within the Composite Csm1 Palm Pocket of Type III-A CRISPR-Cas Csm Complex and Its Release Path.

Chain

Resolution

2.9 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	F	G15 T16 G17 S115 S116 K118 G119 A120 R122 Y199 P201 K207 Q234 I236 G336 W337 S339 W341 M344 G367 K368 K369 E378 K381 T382 R384	G15 T16 G17 S109 S110 K112 G113 A114 R116 Y174 P176 K182 Q209 I211 G307 W308 S310 W312 M315 G338 K339 K340 E342 K345 T346 R348
BS02	rna	F	S97 X175 R198 I236 P237 I238	S91 X155 R173 I211 P212 I213

Gene Ontology

	Molecular Function
GO:0003723	RNA binding

	Biological Process
GO:0051607	defense response to virus

View graph for
Molecular Function

View graph for
Biological Process

External links

PDB	RCSB:6o7h, PDBe:6o7h, PDBj:6o7h
PDBsum	6o7h
PubMed	31326272
UniProt	B6YWC2

[Back to BioLiP]