Structure of PDB 6ifz Chain F

Receptor sequence

>6ifzF (length=216) Species: 767463 (Streptococcus thermophilus ND03) [Search protein sequence]

TFAKIKFSAQIRLETGLHIGGSDAFAAIGAINSPVIKDPITNLPIIPGSS
LKGKMRTLLAKVYNEKVAEKPSDDSDILSRLFGNSKDKRFKMGRLIFRDA
FLSNADELDSLGVRSYTEVKFENTIDRITAEANPRQIERAIRNSTFDFEL
IYEITDENENQVEEDFKVIRDGLKLLELDYLGGSGSRGYGKVAFENLKAT
TVFGNYDVKTLNELLT

3D structure

PDB

6ifz Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference

Chain

Resolution

3.58 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	F	G21 G22 D24 S50 K53 G54 K55 R57 P72 G84 S86 K92 E123 N124 T125 I126 A133 P135 R136 Y181 G183 G184 S187 R188	G20 G21 D23 S49 K52 G53 K54 R56 P71 G83 S85 K91 E122 N123 T124 I125 A132 P134 R135 Y180 G182 G183 S186 R187
BS02	rna	F	D24 I29 N33 A133 N134 P135 R136	D23 I28 N32 A132 N133 P134 R135

External links

PDB	RCSB:6ifz, PDBe:6ifz, PDBj:6ifz
PDBsum	6ifz
PubMed	30503210

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