Structure of PDB 6dmf Chain F

Receptor sequence
>6dmfF (length=514) Species: 411476 (Bacteroides ovatus ATCC 8483) [Search protein sequence]
DPNAQLTTAQLQTYGDLSMMEIYRNYHYAFTQQLMGCWNTTNYGGRHTLD
NNEMSRIWTSFYTQSLKNIIDAQYRTAEDAEKVNINSVLRIYRVYLMSII
TDTYGDAPFSEAGLKFNPKYDKQEDIYNAFFLELEDAVNKIDPTKDKVTG
DLIYAGDVTKWQQLANSLRLRFAMRISSVNPTKAQTEFENALAANGGVIT
DASSDALIKYMTIAFSFGQEAYSDYRGNSLSQLLFGNDPANNPSYLCSTF
FNQLYNSGDPRTFKISRCYYDGLMSATSPDNRVDITQEMIEKGIAFSPRD
PGAYSWEPWPTGYDSDICAELAVNNPSVTATMAREVEPKLANNFLKSDNP
GVVMTSAEVKFLMAEATVKKWNVGSVSAEDLYKQGVRAAIDFLTDNYGCT
ATTDAEFDAFIQDKGAFGHTDNQKLEAINTQAWILHFTNPAECWANVRRS
GYPKLKSPAEYGFGQYLTGGTEIPVRLCYPVLESSYNKKSYNEAIERMGG
TDNWHSLLWWDTEN
3D structure
PDB6dmf Surface glycan-binding proteins are essential for cereal beta-glucan utilization by the human gut symbiont Bacteroides ovatus.
ChainF
Resolution2.4 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC F E60 R95 E21 R56
BS02 BGC F E60 N281 E21 N237
BS03 BGC F W77 D282 W38 D238
BS04 MG F R492 D555 E557 R448 D511 E513
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