Structure of PDB 6djv Chain F

Receptor sequence
>6djvF (length=558) Species: 1773 (Mycobacterium tuberculosis) [Search protein sequence]
QALQKYSTDLTARAREGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEP
GVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLGSMVAGSKYRGEFEER
LKAVLDDIKNSAGQIITFIDELHTIVGAGAAGNMIKPMLARGELRLVGAT
TLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVR
ITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDKEEVGPDD
IADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVR
RSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMS
EYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPD
VFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGSGGSAEQVLAAVRA
TFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVSL
PAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVN
VSPDADSL
3D structure
PDB6djv ATP hydrolysis-coupled peptide translocation mechanism ofMycobacterium tuberculosisClpB.
ChainF
Resolution3.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide F K250 Y655 K92 Y368
BS02 AGS F R571 I573 G610 V611 G612 K613 T614 E615 N721 R808 R284 I286 G323 V324 G325 K326 T327 E328 N434 R521
BS03 AGS F P208 G209 G211 K212 T213 A214 I350 P50 G51 G53 K54 T55 A56 I185
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0009408 response to heat
GO:0034605 cellular response to heat
GO:0042026 protein refolding
Cellular Component
GO:0005737 cytoplasm
GO:0005886 plasma membrane
GO:0009274 peptidoglycan-based cell wall

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6djv, PDBe:6djv, PDBj:6djv
PDBsum6djv
PubMed30257943
UniProtP9WPD1|CLPB_MYCTU Chaperone protein ClpB (Gene Name=clpB)

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