Structure of PDB 6d7f Chain F

Receptor sequence
>6d7fF (length=579) Species: 820 (Bacteroides uniformis) [Search protein sequence]
APQIMNVSARQTTSLDGQWKTIVDPFENGYYDYRLKPYDGGYAQDKTYSD
KTKLQEYDFETDKLLFVPGDWNTQRPQLYYYEGTVWYRKHFEYSLQPGKR
LFLNFGAVNYEAIVWLNGKRLGRHIGGFTPFNFEITNLLKEGTNSLVVKV
DNKRLPEAVPTVNADWWNFGGITRPVTLIEMPATYIRDYYVQLAKDDKNM
IEGWVQLEGSDKEQKITLDIPELKVKKEVTTDANGYASFLIKSKPILWTP
ENPKLYAVNLASETDKVSDEIGFRTIRTEGIKILLNDKEIFCRGISIHEE
TPYYSGRAYSKDHAHTLLSWAKELGCNFVRLAHYPHNEEMVREAERMGFL
VWSEIPVYWTIHWENKDTYQNAEQQLCDMIARDKNRCNIIIWSIANETPH
SKTRLTFLSNLANKARSLDSVRLIGAAMEKEEVQPGVLTVNDPLGELLDI
ISFNEYVGWYDGDSEKCDRVNWTFDTQKPVFISELGGGALYGHHGSPKER
FTEEYQEDLYIRHVNMLKRIPGLAGTTPWILKDFRSPRRHVPEIQDDFNR
KGLVSDKGQKKKAFFVLQKWYKELTEAYK
3D structure
PDB6d7f Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
ChainF
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.31: beta-glucuronidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FYJ F D189 H357 Y382 E421 Y480 Y484 E508 W553 R563 N573 K575 D165 H333 Y358 E397 Y456 Y460 E484 W529 R539 N549 K551
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:6d7f, PDBe:6d7f, PDBj:6d7f
PDBsum6d7f
PubMed30301767
UniProtA0A174CQK8

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