Structure of PDB 5tx1 Chain F

Receptor sequence
>5tx1F (length=950) Species: 46928 (Human adenovirus 26) [Search protein sequence]
MATPSMMPQWAYMHIAGQDASEYLSPGLVQFARATDTYFSLGNKFRNPTV
APTHDVTTDRSQRLTLRFVPVDREATTYLYKARFTLAVGDNRVLDMASTY
FDIRGVLDRGPSFKPYSGTAYNSLAPKGAPNPSQWETKEKQGTTGGVQQE
KDVTKTFGVAATGGINITNQGLLLGTDETAENGKKDIYADKTFQPEPQVG
EENWQENEAFYGGRALKKDTKMKPCYGSFARPTNEKGGQAKFKPVNEGEQ
PKDLDIDFAYFDVPGGSPPAGGSGEEYKADIILYTENVNLETPDTHVVYK
PGTSDNSSEINLVQQSMPNRPNYIGFRDNFVGLMYYNSTGNMGVLAGQAS
QLNAVVDLQDRNTELSYQLLLDSLGDRTRYFSMWNSAVDSYDPDVRIIEN
HGVEDELPNYCFPLNGTGTNSTYQGVKITNGNDGAEESEWEKDDAISRQN
QICKGNVYAMEINLQANLWKSFLYSNVALYLPDSYKYTPANVKLPANTNT
YEYMNGRVVAPSLVDAYINIGARWSLDPMDNVNPFNHPRNAGLRYRSMLL
GNGRYVPFHIQVPQKFFAIKNLLLLPGSYTYEWNFRKDVNMILQSSLGND
LRVDGASVRFDSVNLYATFFPMAHNTASTLEAMLRNDTHDQSFNDYLSAA
NMLYPIPAKATNVPISIPSRNWAAFRGWSFTRLKTKETPSLGSGFDPYFV
YSGSIPYLDGTFYLNHTFKKVSIMFDSSVSWPGNDRLLTPNEFEIKRSVD
GEGYNVAQCNMTKDWFLVQMLSHYNIGYQGFHVPEGYKDRMYSFFRNFQP
MSRQVVDEINYKDYKAVTLPFQHNNSGFTGYLAPTMRQGQPYPANFPYPL
IGQTAVPSVTQKKFLCDRVMWRIPFSSNFMSMGALTDLGQNMLYANSAHA
LDMTFEVDPMDEPTLLYLLFEVFDVVRVHQPHRGVIEAVYLRTPFSAGNA
3D structure
PDB5tx1 Cryo-EM structure of human adenovirus D26 reveals the conservation of structural organization among human adenoviruses.
ChainF
Resolution3.7 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide F A20 S21 L24 Q30 R33 A34 Y38 G42 N43 F45 R46 N47 A20 S21 L24 Q30 R33 A34 Y38 G42 N43 F45 R46 N47
BS02 peptide F L352 N353 A938 V939 Y940 L941 S946 G948 L352 N353 A938 V939 Y940 L941 S946 G948
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0046718 symbiont entry into host cell
GO:0075521 microtubule-dependent intracellular transport of viral material towards nucleus
Cellular Component
GO:0019028 viral capsid
GO:0039623 T=25 icosahedral viral capsid
GO:0042025 host cell nucleus
GO:0043657 host cell

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5tx1, PDBe:5tx1, PDBj:5tx1
PDBsum5tx1
PubMed28508067
UniProtQ3S8B3

[Back to BioLiP]