Structure of PDB 5n9g Chain F

Receptor sequence
>5n9gF (length=289) Species: 9606 (Homo sapiens) [Search protein sequence]
VSRSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKK
EVLVGCCVLITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDV
PSLCLAELVKTYCSSFKLFQASPSVPAKYVEDKEKMLSRTMQLVELANET
WLVTGRHPLPVITAATFLAWQSLQPADRLSCSLARFCKLANVDLPYPASS
RLQELLAVLLRMAEQLAWLRVLRLDKRSVVKHIGDLLQHRQSLVRSAFAL
LLPPCMLKTVTGDENISDSEIEQYLRTPQEVRDFQRAQA
3D structure
PDB5n9g Molecular mechanisms of Bdp1 in TFIIIB assembly and RNA polymerase III transcription initiation.
ChainF
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna F G105 A108 R110 G219 H221 Y260 P261 R265 C361 G41 A44 R46 G155 H157 Y196 P197 R201 C255
BS02 rna F S66 S68 R110 L111 K114 S150 K158 S246 S2 S4 R46 L47 K50 S86 K94 S182
Gene Ontology
Biological Process
GO:0006352 DNA-templated transcription initiation
GO:0070897 transcription preinitiation complex assembly

View graph for
Biological Process
External links
PDB RCSB:5n9g, PDBe:5n9g, PDBj:5n9g
PDBsum5n9g
PubMed28743884
UniProtQ9HAW0|BRF2_HUMAN Transcription factor IIIB 50 kDa subunit (Gene Name=BRF2)

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