Structure of PDB 5mqp Chain F

Receptor sequence
>5mqpF (length=599) Species: 818 (Bacteroides thetaiotaomicron) [Search protein sequence]
AGEIWISPQGNDLNDGTRPSPKATLTSALRQAREWRRTDDERVRGGITIC
MEGGTYALYEPVFIRPEDSGTEDSPTVIRPVADEKVVLSGGIRIGGWKKQ
GKLWVADVPMFNGRPLDFRQLWVNGKKAVRARDVEDFEKMNRICSVDEKN
EILYVPAVAIRRLVDGKGALKAKYAEMVLHQMWCVANLRIRSVELAGDSA
AIRFHQPESRIQFEHPWPRPMVTTDGHNSAFYLTNARELLDVAGEWYHDI
DARKVYYYPREGEKLQDAGTEVIVPAIETLIQVKGTFDRPVSHIRFEKIT
FSHTTWMRPSEKGHVPLQAGMYLTDGYRIDPKMERDYLNHPLDNQGWLGR
PAAAVSVAAANQIDFERCRFDHLGSTGLDYEEAVQGGVVRGCLFRDIAGN
GLVVGSFSPAAHETHLPYDPTDLREVCAHQQISNCYFTEVGNEDWGCLAI
LAGYVKDINIEHNEICEVPYSGISLGWGWTQTVNCMRNNRVHANLIHHYA
KHMYDVAGVYTLGSQPKSYVTENCVHSIYKPGYVHDPNHWFYLYTDEGSS
FITVRDNWTEGEKYLQNANGPGNVWENNGPQVDTVIRERAGLEAEYRDL
3D structure
PDB5mqp The most complex carbohydrate known is degraded in the human gut by single organisms and not bacterial consortia
ChainF
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.22: alpha-galactosidase.
3.2.1.n1: blood group B branched chain alpha-1,3-galactosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA F R150 L257 D259 E263 R132 L239 D241 E245
External links