Structure of PDB 5cch Chain F

Receptor sequence
>5cchF (length=266) Species: 10116 (Rattus norvegicus) [Search protein sequence]
KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK
KKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDII
GEFKVPMNTVDFGHVTEEWRDLQSAEKEKLGDICFSLRYVPTAGKLTVVI
LEAKNLKKSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPF
EQIQKVQVVVTVLDYDNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQ
WHTLQVEEEVDAMLAV
3D structure
PDB5cch Architecture of the synaptotagmin-SNARE machinery for neuronal exocytosis.
ChainF
Resolution3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA F D172 D230 F231 D232 D32 D90 F91 D92
BS02 CA F D172 D178 F231 D232 D32 D38 F91 D92
BS03 CA F D309 Y364 D160 Y215
BS04 CA F D363 D365 D214 D216
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:5cch, PDBe:5cch, PDBj:5cch
PDBsum5cch
PubMed26280336
UniProtP21707|SYT1_RAT Synaptotagmin-1 (Gene Name=Syt1)

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