Structure of PDB 5ava Chain F

Receptor sequence
>5avaF (length=238) Species: 3885 (Phaseolus vulgaris) [Search protein sequence]
ASQTSFSFQRFNETNLILQRDATVSSKGQLRLTNVNDNGEPTLSSLGRAF
YSAPIQIWDNTTGAVASFATSFTFNIDVPNNSGPADGLAFVLLPVGSQPK
DKGGLLGLFNNYKYDSNAHTVAVEFDTLYNVHWDPKPRHIGIDVNSIKSI
KTTTWDFVKGENAEVLITYDSSTKLLVASLVYPSLKTSFIVSDTVDLKSV
LPEWVIVGFTATTGITKGNVETNDILSWSFASKLSDGT
3D structure
PDB5ava Atomic visualization of a flipped-back conformation of bisected glycans bound to specific lectins
ChainF
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN F G124 G125 W154 G103 G104 W133
BS02 MN F E145 D147 D155 H160 E124 D126 D134 H139
BS03 CA F D147 L149 N151 D155 D126 L128 N130 D134
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding

View graph for
Molecular Function
External links
PDB RCSB:5ava, PDBe:5ava, PDBj:5ava
PDBsum5ava
PubMed26971576
UniProtP05088|PHAE_PHAVU Erythroagglutinating phytohemagglutinin (Gene Name=DLEC1)

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