Structure of PDB 4rjk Chain F

Receptor sequence
>4rjkF (length=552) Species: 1415167 (Bacillus subtilis PY79) [Search protein sequence]
NRGAELVVDCLVEQGVTHVFGIPGAKIDAVFDALQDKGPEIIVARHEQNA
AFMAQAVGRLTGKPGVVLVTSGPGASNLATGLLTANTEGDPVVALAGNVI
RADRLKRTHQSLDNAALFQPITKYSVEVQDVKNIPEAVTNAFRIASAGQA
GAAFVSFPQDVVNEVTNTKNVRAVAAPKLGPAADDAISAAIAKIQTAKLP
VVLVGMKGGRPEAIKAVRKLLKKVQLPFVETYQAAGTLSRDLEDQYFGRI
GLFRNQPGDLLLEQADVVLTIGYDPIEYDPKFWNINGDRTIIHLDEIIAD
IDHAYQPDLELIGDIPSTINHIEHDAVKVEFAEREQKILSDLKQYMHEGE
QVPADWKSDRAHPLEIVKELRNAVDDHVTVTCDIGSHAIWMSRYFRSYEP
LTLMISNGMQTLGVALPWAIGASLVKPGEKVVSVSGDGGFLFSAMELETA
VRLKAPIVHIVWNDSTYDMVAFQQLKKYNRTSAVDFGNIDIVKYAESFGA
TGLRVESPDQLADVLRQGMNAEGPVIIDVPVDYSDNINLASDKLPKEFGE
LM
3D structure
PDB4rjk Detailed Structure-Function Correlations of Bacillus subtilis Acetolactate Synthase.
ChainF
Resolution2.5 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 TPP F P37 E61 P87 P23 E47 P73
BS02 TPP F G399 S400 H401 Q424 L426 G450 D451 G452 G453 T480 Y481 D482 M483 V484 Y547 G385 S386 H387 Q410 L412 G436 D437 G438 G439 T466 Y467 D468 M469 V470 Y533
BS03 MG F D451 D478 T480 D437 D464 T466
BS04 PYR F A39 K40 A25 K26
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 23 03:20:05 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '4rjk', asym_id = 'F', title = 'Detailed Structure-Function Correlations of Bacillus subtilis Acetolactate Synthase.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='4rjk', asym_id='F', title='Detailed Structure-Function Correlations of Bacillus subtilis Acetolactate Synthase.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0000287,0003824,0003984,0030976,0034077', uniprot = '', pdbid = '4rjk', asym_id = 'F'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0000287,0003824,0003984,0030976,0034077', uniprot='', pdbid='4rjk', asym_id='F')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>