Structure of PDB 4mji Chain F

Receptor sequence

>4mjiF (length=275) Species: 9606 (Homo sapiens) [Search protein sequence]

GSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRTEPRAP
WIEQEGPEYWDRNTQIFKTNTQTYRENLRIALRYYNQSEAGSHTWQTMYG
CDVGPDGRLLRGHNQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAA
REAEQLRAYLEGLCVEWLRRHLENGKETLQRADPPKTHVTHHPVSDHEAT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVP
SGEEQRYTCHVQHEGLPKPLTLRWE

3D structure

PDB

4mji Molecular basis of a dominant T cell response to an HIV reverse transcriptase 8-mer epitope presented by the protective allele HLA-B*51:01

Chain

Resolution

2.99 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	F	Y7 Y9 N63 I66 F67 N70 T73 Y74 N77 I80 Y84 Y99 Y116 T143 W147 E152 L156 Y159 L163 W167	Y7 Y9 N63 I66 F67 N70 T73 Y74 N77 I80 Y84 Y99 Y116 T143 W147 E152 L156 Y159 L163 W167

External links

PDB	RCSB:4mji, PDBe:4mji, PDBj:4mji
PDBsum	4mji
PubMed	24600035
UniProt	P01889\|HLAB_HUMAN HLA class I histocompatibility antigen, B alpha chain (Gene Name=HLA-B)

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