Structure of PDB 4cfe Chain F

Receptor sequence
>4cfeF (length=288) Species: 9606 (Homo sapiens) [Search protein sequence]
SVYTSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWD
SKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYPLVCI
SPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITE
FPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVD
EKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSVLKCYLHETLET
IINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALVLT
3D structure
PDB4cfe Structural Basis of Ampk Regulation by Small Molecule Activators.
ChainF
Resolution3.023 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AMP F T87 T89 D90 V130 I150 R152 T61 T63 D64 V98 I118 R120
BS02 AMP F K170 I240 S242 D245 R269 V276 L277 V297 H298 R299 K138 I208 S210 D213 R237 V239 L240 V260 H261 R262
BS03 AMP F H151 T200 I204 A205 V225 S226 H298 S314 S316 D317 H119 T168 I172 A173 V193 S194 H261 S277 S279 D280
Gene Ontology
Molecular Function
GO:0004672 protein kinase activity
GO:0004691 cAMP-dependent protein kinase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008603 cAMP-dependent protein kinase regulator activity
GO:0016208 AMP binding
GO:0019887 protein kinase regulator activity
GO:0019901 protein kinase binding
GO:0043531 ADP binding
Biological Process
GO:0006110 regulation of glycolytic process
GO:0006468 protein phosphorylation
GO:0006633 fatty acid biosynthetic process
GO:0007165 signal transduction
GO:0007283 spermatogenesis
GO:0010628 positive regulation of gene expression
GO:0031669 cellular response to nutrient levels
GO:0045860 positive regulation of protein kinase activity
GO:0051170 import into nucleus
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0016020 membrane
GO:0031588 nucleotide-activated protein kinase complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4cfe, PDBe:4cfe, PDBj:4cfe
PDBsum4cfe
PubMed24352254
UniProtP54619|AAKG1_HUMAN 5'-AMP-activated protein kinase subunit gamma-1 (Gene Name=PRKAG1)

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